PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr8P22120_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 240aa    MW: 28001.3 Da    PI: 8.0213
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr8P22120_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.31e-1154109255
                            HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C....TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   2 rrahnerErrRRdriNsafeeLrellPk.as.kapskKlsKaeiLekAveYIksLq 55 
                            +  hn+ Er RR+++N+ ++ Lr+llP+ +  + ++kKls   i+ ++ +Y+ +Lq
  GSMUA_Achr8P22120_001  54 KLCHNAYERDRRKKLNDLYSSLRDLLPEsDQaRKKKKKLSIPLIVCRVLKYVPELQ 109
                            678*************************8765666666999999999999988887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.09E-1349125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.52E-750113No hitNo description
Gene3DG3DSA:4.10.280.104.6E-1151123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.00852108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.8E-954109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-658114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MGWQPEDITA HVLHYEDPFA CYPYMEELEI GHDDLLRHCS VLAAKDDSSS STKKLCHNAY  60
ERDRRKKLND LYSSLRDLLP ESDQARKKKK KLSIPLIVCR VLKYVPELQR QVERLSRRKE  120
EILLALSRPE EQSHCVRSAV QYPMVSATCL SKREVMVQLC VVNKDATFSF SKILKVLERE  180
GLHLMNSSNY TTCDGRCVCS LHLQAREDFR SECRIFCEHL MEEIKEQARH GSNLPRSLWM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009414172.11e-178PREDICTED: transcription factor bHLH101-like
TrEMBLM0TSL51e-178M0TSL5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P22120_0011e-177(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32803472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.14e-34bHLH family protein